STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH89894.1Dipeptidase E; Belongs to the peptidase S51 family. (221 aa)    
Predicted Functional Partners:
SDH89928.1
Hypothetical protein.
 
     0.727
SDI00841.1
Protein of unknown function.
  
     0.544
SDH37536.1
Ribosomal protein S18 acetylase RimI.
 
     0.539
SDH47358.1
Hypothetical protein.
  
     0.501
SDH87868.1
Hypothetical protein.
 
    0.488
SDH98379.1
Hypothetical protein.
  
     0.482
SDH31188.1
Putative glucoamylase.
  
     0.446
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.