STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH90889.1Phosphotransferase enzyme family protein. (361 aa)    
Predicted Functional Partners:
SDH94578.1
DivIVA domain-containing protein.
  
     0.760
SDH75953.1
Sec-independent protein translocase protein TatB.
  
     0.728
SDH29806.1
Part of AAA domain-containing protein.
  
     0.725
SDH27200.1
Protein of unknown function.
  
     0.699
SDH77788.1
Protein of unknown function; Manually curated.
  
     0.699
SDH30447.1
Hypothetical protein.
  
     0.688
SDH82268.1
Hypothetical protein.
  
     0.681
SDH32419.1
Cytochrome oxidase assembly protein ShyY1.
  
     0.677
SDH90933.1
ATP-dependent DNA helicase, Rep family.
       0.663
SDH90913.1
NAD+ diphosphatase.
       0.660
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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