STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH91858.1Multimeric flavodoxin WrbA. (239 aa)    
Predicted Functional Partners:
SDH09517.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.707
SDH48402.1
LysM domain-containing protein.
   
    0.602
SDH91836.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.570
SDH31072.1
Hypothetical protein.
   
    0.517
SDH50803.1
Lycopene cyclase domain-containing protein.
   
    0.517
SDH55991.1
Transmembrane protein of unknown function.
   
    0.517
SDH91883.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.517
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.