STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH92022.1TadE-like protein. (130 aa)    
Predicted Functional Partners:
SDH92046.1
Hypothetical protein.
 
     0.959
SDH92000.1
Hypothetical protein.
 
     0.955
SDH92074.1
Hypothetical protein.
 
     0.954
SDH91953.1
Tight adherence protein B.
 
    0.952
SDH91978.1
Tight adherence protein C.
 
    0.947
SDH91933.1
Pilus assembly protein CpaF.
 
    0.802
SDH84517.1
Hypothetical protein.
 
    0.801
SDH84545.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
 
     0.781
SDH44717.1
Hypothetical protein.
  
     0.755
SDH84448.1
Hypothetical protein.
  
     0.745
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.