Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH38320.1 | SDH92206.1 | SAMN04489720_1103 | SAMN04489720_2867 | AAA+-type ATPase, SpoVK/Ycf46/Vps4 family. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | 0.511 |
SDH38320.1 | guaB | SAMN04489720_1103 | SAMN04489720_0947 | AAA+-type ATPase, SpoVK/Ycf46/Vps4 family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.567 |
SDH44157.1 | SDH92206.1 | SAMN04489720_1272 | SAMN04489720_2867 | Phenol 2-monooxygenase. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | 0.654 |
SDH47237.1 | SDH92206.1 | SAMN04489720_1362 | SAMN04489720_2867 | 2-polyprenyl-6-methoxyphenol hydroxylase. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | 0.654 |
SDH92185.1 | SDH92206.1 | SAMN04489720_2866 | SAMN04489720_2867 | hydroxymethylglutaryl-CoA synthase. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | 0.993 |
SDH92185.1 | SDH92246.1 | SAMN04489720_2866 | SAMN04489720_2869 | hydroxymethylglutaryl-CoA synthase. | Phosphomevalonate kinase. | 0.955 |
SDH92185.1 | SDH92272.1 | SAMN04489720_2866 | SAMN04489720_2870 | hydroxymethylglutaryl-CoA synthase. | Diphosphomevalonate decarboxylase. | 0.989 |
SDH92185.1 | SDH92296.1 | SAMN04489720_2866 | SAMN04489720_2871 | hydroxymethylglutaryl-CoA synthase. | Mevalonate kinase. | 0.955 |
SDH92185.1 | fni | SAMN04489720_2866 | SAMN04489720_2868 | hydroxymethylglutaryl-CoA synthase. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.953 |
SDH92206.1 | SDH38320.1 | SAMN04489720_2867 | SAMN04489720_1103 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | AAA+-type ATPase, SpoVK/Ycf46/Vps4 family. | 0.511 |
SDH92206.1 | SDH44157.1 | SAMN04489720_2867 | SAMN04489720_1272 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Phenol 2-monooxygenase. | 0.654 |
SDH92206.1 | SDH47237.1 | SAMN04489720_2867 | SAMN04489720_1362 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.654 |
SDH92206.1 | SDH92185.1 | SAMN04489720_2867 | SAMN04489720_2866 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | hydroxymethylglutaryl-CoA synthase. | 0.993 |
SDH92206.1 | SDH92246.1 | SAMN04489720_2867 | SAMN04489720_2869 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Phosphomevalonate kinase. | 0.952 |
SDH92206.1 | SDH92272.1 | SAMN04489720_2867 | SAMN04489720_2870 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Diphosphomevalonate decarboxylase. | 0.967 |
SDH92206.1 | SDH92296.1 | SAMN04489720_2867 | SAMN04489720_2871 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Mevalonate kinase. | 0.992 |
SDH92206.1 | fni | SAMN04489720_2867 | SAMN04489720_2868 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.908 |
SDH92206.1 | guaB | SAMN04489720_2867 | SAMN04489720_0947 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.518 |
SDH92206.1 | menA | SAMN04489720_2867 | SAMN04489720_2227 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.818 |
SDH92246.1 | SDH92185.1 | SAMN04489720_2869 | SAMN04489720_2866 | Phosphomevalonate kinase. | hydroxymethylglutaryl-CoA synthase. | 0.955 |
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