Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDH36644.1 | SDH93574.1 | SAMN04489720_1054 | SAMN04489720_2925 | FHA domain-containing protein. | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.456 |
| SDH93546.1 | SDH93574.1 | SAMN04489720_2924 | SAMN04489720_2925 | FAD/FMN-containing dehydrogenase. | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.551 |
| SDH93546.1 | SDH93607.1 | SAMN04489720_2924 | SAMN04489720_2926 | FAD/FMN-containing dehydrogenase. | Uncharacterized membrane protein YoaT, DUF817 family. | 0.551 |
| SDH93574.1 | SDH36644.1 | SAMN04489720_2925 | SAMN04489720_1054 | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | FHA domain-containing protein. | 0.456 |
| SDH93574.1 | SDH93546.1 | SAMN04489720_2925 | SAMN04489720_2924 | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | FAD/FMN-containing dehydrogenase. | 0.551 |
| SDH93574.1 | SDH93607.1 | SAMN04489720_2925 | SAMN04489720_2926 | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Uncharacterized membrane protein YoaT, DUF817 family. | 0.773 |
| SDH93574.1 | obg | SAMN04489720_2925 | SAMN04489720_3091 | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.664 |
| SDH93574.1 | rplA | SAMN04489720_2925 | SAMN04489720_2285 | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.413 |
| SDH93607.1 | SDH93546.1 | SAMN04489720_2926 | SAMN04489720_2924 | Uncharacterized membrane protein YoaT, DUF817 family. | FAD/FMN-containing dehydrogenase. | 0.551 |
| SDH93607.1 | SDH93574.1 | SAMN04489720_2926 | SAMN04489720_2925 | Uncharacterized membrane protein YoaT, DUF817 family. | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.773 |
| obg | SDH93574.1 | SAMN04489720_3091 | SAMN04489720_2925 | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.664 |
| obg | rplA | SAMN04489720_3091 | SAMN04489720_2285 | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.867 |
| rplA | SDH93574.1 | SAMN04489720_2285 | SAMN04489720_2925 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 16S rRNA (guanine1207-N2)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.413 |
| rplA | obg | SAMN04489720_2285 | SAMN04489720_3091 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.867 |