STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH94249.1FAD/FMN-containing dehydrogenase. (744 aa)    
Predicted Functional Partners:
SDH20315.1
Amino acid adenylation domain-containing protein.
   
 0.812
SDH10259.1
Glutamate synthase (NADH) large subunit.
    
 0.810
SDI00483.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
    
  0.768
SDH87266.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
  
 0.751
SDH94273.1
DNA-binding transcriptional regulator, MarR family.
 
  
  0.708
SDH48795.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
 0.692
SDH79769.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.680
SDI03687.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
   
 
  0.678
SDH46692.1
L-lactate dehydrogenase (cytochrome).
  
 0.591
SDH57272.1
Glycolate oxidase.
  
 0.591
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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