SDH96238.1 protein (Agrococcus jejuensis) - STRING interaction network

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Score

SDH96238.1

ATP-binding cassette protein, ChvD family. (560 aa)

Predicted Functional Partners:

SDH96268.1

0.831

rpsE

0.828

rpmG

0.828

rplQ

0.821

rplU

0.814

rpsO

0.813

rpsC

0.812

rplM

0.811

rplR

0.807

rpmH

0.807

Your Current Organism:

Agrococcus jejuensis

NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDH96238.1	SDH96268.1	SAMN04489720_3015	SAMN04489720_3016	ATP-binding cassette protein, ChvD family.	acyl-CoA thioester hydrolase.	0.831
SDH96238.1	rplM	SAMN04489720_3015	SAMN04489720_0971	ATP-binding cassette protein, ChvD family.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.811
SDH96238.1	rplQ	SAMN04489720_3015	SAMN04489720_0976	ATP-binding cassette protein, ChvD family.	LSU ribosomal protein L17P.	0.821
SDH96238.1	rplR	SAMN04489720_3015	SAMN04489720_1003	ATP-binding cassette protein, ChvD family.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.807
SDH96238.1	rplU	SAMN04489720_3015	SAMN04489720_3089	ATP-binding cassette protein, ChvD family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.814
SDH96238.1	rpmG	SAMN04489720_3015	SAMN04489720_1487	ATP-binding cassette protein, ChvD family.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.828
SDH96238.1	rpmH	SAMN04489720_3015	SAMN04489720_1605	ATP-binding cassette protein, ChvD family.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.807
SDH96238.1	rpsC	SAMN04489720_3015	SAMN04489720_1012	ATP-binding cassette protein, ChvD family.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.812
SDH96238.1	rpsE	SAMN04489720_3015	SAMN04489720_1002	ATP-binding cassette protein, ChvD family.	SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.828
SDH96238.1	rpsO	SAMN04489720_3015	SAMN04489720_0477	ATP-binding cassette protein, ChvD family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.813
SDH96268.1	SDH96238.1	SAMN04489720_3016	SAMN04489720_3015	acyl-CoA thioester hydrolase.	ATP-binding cassette protein, ChvD family.	0.831
rplM	SDH96238.1	SAMN04489720_0971	SAMN04489720_3015	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	ATP-binding cassette protein, ChvD family.	0.811
rplM	rplQ	SAMN04489720_0971	SAMN04489720_0976	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L17P.	0.999
rplM	rplR	SAMN04489720_0971	SAMN04489720_1003	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplM	rplU	SAMN04489720_0971	SAMN04489720_3089	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplM	rpmG	SAMN04489720_0971	SAMN04489720_1487	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.994
rplM	rpmH	SAMN04489720_0971	SAMN04489720_1605	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.997
rplM	rpsC	SAMN04489720_0971	SAMN04489720_1012	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplM	rpsE	SAMN04489720_0971	SAMN04489720_1002	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.999
rplM	rpsO	SAMN04489720_0971	SAMN04489720_0477	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999