STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH96508.1Hemoglobin. (133 aa)    
Predicted Functional Partners:
SDH23980.1
Organic hydroperoxide reductase OsmC/OhrA.
      0.837
SDH96539.1
Small conductance mechanosensitive channel.
       0.834
SDH96578.1
Aminopeptidase N.
       0.820
SDH96484.1
Hypothetical protein.
       0.805
SDH75076.1
Alpha-glucosidase.
      0.694
SDH96646.1
Ribose 5-phosphate isomerase B.
       0.633
SDH96610.1
2-hydroxychromene-2-carboxylate isomerase; Manually curated.
       0.589
SDH96672.1
Endonuclease-8; Belongs to the FPG family.
       0.576
SDH88021.1
Predicted dithiol-disulfide isomerase, DsbA family.
  
  
 0.496
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.