STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH98681.1Transcriptional regulator, LacI family. (329 aa)    
Predicted Functional Partners:
SDH10259.1
Glutamate synthase (NADH) large subunit.
    
 
 0.863
SDH30820.1
PTS system, sucrose-specific IIC component.
    
 0.854
SDH54602.1
PTS system N-acetylglucosamine-specific IIA component, Glc family /PTS system N-acetylglucosamine-specific IIB component, Glc family.
    
 0.854
SDH98762.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
 
     0.835
SDH98703.1
Multiple sugar transport system permease protein.
 
     0.817
SDH98734.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.807
SDH98818.1
ADP-ribosylglycohydrolase.
 
     0.729
SDH98846.1
Hypothetical protein.
 
     0.713
SDH34018.1
Phosphocarrier protein HPr.
    
   0.707
SDI00674.1
Phosphocarrier protein HPr /dihydroxyacetone kinase DhaM subunit.
   
   0.707
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.