STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI00058.1FGGY family of carbohydrate kinases, N-terminal domain. (472 aa)    
Predicted Functional Partners:
SDH19973.1
L-fuculose-phosphate aldolase.
  
 
 0.844
SDH10594.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.831
SDH83550.1
Gluconate kinase, SKI family.
     
 0.802
SDH55773.1
6-phosphogluconate dehydrogenase (decarboxylating).
  
 
 0.787
SDH82999.1
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.783
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
 0.777
SDI00011.1
CoA:oxalate CoA-transferase; Belongs to the CoA-transferase III family.
  
    0.776
SDI00037.1
Transcriptional regulator, GntR family.
       0.774
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
     
 0.762
SDH83089.1
Gluconolactonase.
  
 
 0.759
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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