STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI00151.1Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (123 aa)    
Predicted Functional Partners:
SDH94958.1
Cysteine desulfurase.
 
  
 0.800
SDH46872.1
Nitrogen fixation protein NifU.
  
  
 0.755
SDH97974.1
Hypothetical protein.
    
 
 0.740
SDH92941.1
2-oxoglutarate dehydrogenase E1 component.
  
   
 0.714
SDI00119.1
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase.
       0.703
SDH30344.1
Hypothetical protein; Belongs to the GcvT family.
 
 
 0.690
SDH49614.1
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit.
  
  
 0.665
SDI00197.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
     0.664
SDI00168.1
Cytochrome c oxidase subunit 2.
 
    0.660
SDI03651.1
Fe-S cluster assembly ATP-binding protein.
  
 
 0.630
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.