Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDI01413.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
SDI01443.1
Hypothetical protein.
       0.592
SDH86360.1
Alkylhydroperoxidase domain protein, Avi_7169 family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
 
  0.588
SDH54530.1
Transcriptional regulator, GntR family.
  
    0.454
SDH28395.1
GntR family transcriptional regulator.
  
    0.444
SDH79739.1
Transcriptional regulator, GntR family.
  
    0.442
SDH18252.1
Transcriptional regulator, GntR family.
  
    0.430
SDI00037.1
Transcriptional regulator, GntR family.
  
    0.424
SDI01477.1
Hypothetical protein.
       0.418
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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