STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmen_2351NADPH-glutathione reductase; Maintains high levels of reduced glutathione. (452 aa)    
Predicted Functional Partners:
Pmen_3246
PFAM: Transketolase, central region; Transketolase domain protein.
 
 0.973
Pmen_2670
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain.
  
 0.945
gshB
TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; Belongs to the prokaryotic GSH synthase family.
  
  
 0.942
Pmen_3224
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Belongs to the GST superfamily.
  
 0.940
Pmen_0933
PFAM: Glutathione S-transferase, N-terminal domain.
  
 0.935
Pmen_1914
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain.
  
 0.931
Pmen_3861
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain.
  
 
 0.931
Pmen_1762
PFAM: glutathione peroxidase; Redoxin domain protein; Belongs to the glutathione peroxidase family.
  
 0.928
Pmen_3641
Peroxiredoxin; PFAM: glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
 0.928
Pmen_1909
Peroxiredoxin; PFAM: glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
 0.927
Your Current Organism:
Pseudomonas mendocina ymp
NCBI taxonomy Id: 399739
Other names: P. mendocina ymp, Pseudomonas mendocina str. ymp, Pseudomonas mendocina strain ymp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.