Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pmen_2451 | Pmen_2452 | Pmen_2451 | Pmen_2452 | PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer. | Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein. | 0.503 |
Pmen_2451 | Pmen_2453 | Pmen_2451 | Pmen_2453 | PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer. | Hypothetical protein. | 0.503 |
Pmen_2451 | selD | Pmen_2451 | Pmen_2455 | PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer. | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | 0.429 |
Pmen_2451 | selU | Pmen_2451 | Pmen_2454 | PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.429 |
Pmen_2452 | Pmen_2451 | Pmen_2452 | Pmen_2451 | Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein. | PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer. | 0.503 |
Pmen_2452 | Pmen_2453 | Pmen_2452 | Pmen_2453 | Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein. | Hypothetical protein. | 0.800 |
Pmen_2452 | Pmen_2456 | Pmen_2452 | Pmen_2456 | Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein. | PFAM: Patatin. | 0.525 |
Pmen_2452 | selD | Pmen_2452 | Pmen_2455 | Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein. | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | 0.699 |
Pmen_2452 | selU | Pmen_2452 | Pmen_2454 | Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.686 |
Pmen_2453 | Pmen_2451 | Pmen_2453 | Pmen_2451 | Hypothetical protein. | PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer. | 0.503 |
Pmen_2453 | Pmen_2452 | Pmen_2453 | Pmen_2452 | Hypothetical protein. | Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein. | 0.800 |
Pmen_2453 | Pmen_2456 | Pmen_2453 | Pmen_2456 | Hypothetical protein. | PFAM: Patatin. | 0.525 |
Pmen_2453 | selD | Pmen_2453 | Pmen_2455 | Hypothetical protein. | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | 0.687 |
Pmen_2453 | selU | Pmen_2453 | Pmen_2454 | Hypothetical protein. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.687 |
Pmen_2456 | Pmen_2452 | Pmen_2456 | Pmen_2452 | PFAM: Patatin. | Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein. | 0.525 |
Pmen_2456 | Pmen_2453 | Pmen_2456 | Pmen_2453 | PFAM: Patatin. | Hypothetical protein. | 0.525 |
Pmen_2456 | selD | Pmen_2456 | Pmen_2455 | PFAM: Patatin. | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | 0.597 |
Pmen_2456 | selU | Pmen_2456 | Pmen_2454 | PFAM: Patatin. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.597 |
Pmen_4368 | selD | Pmen_4368 | Pmen_2455 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. | 0.900 |
Pmen_4368 | selU | Pmen_4368 | Pmen_2454 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.521 |
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