STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_0740TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE0648 sugar efflux transporter. (399 aa)    
Predicted Functional Partners:
Spro_3503
KEGG: yen:YE1145 hypothetical protein.
  
     0.616
Spro_2586
PFAM: protein of unknown function DUF1471; KEGG: ypi:YpsIP31758_1829 hypothetical protein.
  
     0.596
Spro_4383
PFAM: cytochrome b562; KEGG: yen:YE3788 putative cytochrome.
  
     0.505
Spro_0071
KEGG: yen:YE4149 hypothetical protein.
  
     0.493
sgrR
Extracellular solute-binding protein family 5; Activates the small RNA gene sgrS under glucose-phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding these molecules in its C-terminal solute-binding domain.
 
   
 0.487
aaeX
PFAM: protein of unknown function DUF1656; KEGG: stm:STM3366 putative inner membrane protein.
  
   
 0.487
Spro_0741
TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rfr:Rfer_1465 anion transporter.
       0.482
Spro_0739
Hypothetical protein.
       0.470
Spro_0219
PFAM: protein of unknown function DUF1145; KEGG: yen:YE0223 hypothetical protein.
  
     0.469
Spro_0510
KEGG: ypp:YPDSF_3277 hypothetical protein; Belongs to the UPF0306 family.
  
     0.463
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.