STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_0870PFAM: P2 phage tail completion R family protein; KEGG: yps:YPTB1850 gpR [Enterobacteria phage P2]. (154 aa)    
Predicted Functional Partners:
Spro_0868
PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 possible phage-related protein.
 
    0.989
Spro_0873
PFAM: tail X family protein; KEGG: yps:YPTB1757 putative phage-related tail protein.
 
    0.987
Spro_0861
PFAM: tail E family protein; KEGG: yps:YPTB1743 putative tail protein gpE P2 bacteriophage.
 
    0.984
Spro_0866
TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: yen:YE1663 phage tail protein.
 
    0.968
Spro_0874
PFAM: replication gene A; KEGG: ecv:APECO1_4464 putative phage replication initiation protein.
  
    0.967
Spro_0872
KEGG: yps:YPTB1756 putative prophage Hp1 family holin.
  
    0.955
Spro_0867
PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein.
 
    0.943
Spro_0869
TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: yps:YPTB1751 putative phage-related baseplate assembly protein.
 
    0.943
Spro_0858
PFAM: P2 GpU family protein; KEGG: yps:YPTB1740 putative phage tail protein.
 
    0.941
Spro_2044
PFAM: P2 GpU family protein; KEGG: syf:Synpcc7942_0751 hypothetical protein.
 
    0.927
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.