Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Spro_1963Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: kpn:KPN_00511 putative bacterial inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (342 aa)    
Predicted Functional Partners:
rbsA-2
ABC transporter-related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.992
Spro_1964
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_01166 ABC-type sugar transport system, periplasmic component.
 
 0.986
Spro_1961
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_00509 putative periplasmic binding protein.
 
 0.985
Spro_4898
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0011 putative D-ribose-binding periplasmic protein precursor.
 
 0.899
rbsA-3
ABC transporter-related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.872
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.872
Spro_2395
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_00509 putative periplasmic binding protein.
 
 
 0.854
Spro_4694
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_0365 carbohydrate uptake (CUT2 family) ABC transporter, ATP-binding protein.
 
 
 0.854
araG
ABC transporter-related protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 
 0.845
Spro_3218
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2762 putative ABC transport system ATP-binding protein.
 
   0.844
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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