STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_2131ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: ypi:YpsIP31758_1703 chelated iron ABC transporter, permease protein YfeC. (286 aa)    
Predicted Functional Partners:
Spro_2133
PFAM: periplasmic solute binding protein; KEGG: eca:ECA2392 periplasmic chelated iron-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.997
Spro_2132
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE1899 ATP-binding transport protein.
 
 0.996
Spro_2130
PFAM: ABC-3 protein; KEGG: yen:YE1897 chelated iron transport system membrane protein.
 
 
0.989
Spro_1123
PFAM: periplasmic solute binding protein; KEGG: yen:YE3109 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
 0.936
znuC
ABC transporter-related protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 
 0.770
Spro_1121
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3111 ABC transport system ATP-binding protein.
 
   
 0.766
Spro_2773
PFAM: periplasmic solute binding protein; KEGG: yen:YE2388 exported high-affinity zinc uptake system protein.
 
  
 0.755
Spro_2775
ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: ypi:YpsIP31758_2029 high-affinity zinc uptake ABC transporter, permease protein.
  
  
 
0.515
Spro_1122
PFAM: ABC-3 protein; KEGG: yen:YE3110 putative ABC-transporter membrane protein.
  
  
 
0.514
Spro_2134
KEGG: kpn:KPN_02184 hypothetical protein.
       0.493
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.