Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Spro_2467PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ypp:YPDSF_1874 transporter protein. (453 aa)    
Predicted Functional Partners:
Spro_2468
PFAM: Formaldehyde-activating enzyme (Fae); KEGG: ypi:YpsIP31758_1542 hypothetical protein.
       0.683
Spro_2470
TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: yen:YE3793 succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.665
Spro_2469
PFAM: aldo/keto reductase; KEGG: ypi:YpsIP31758_1541 oxidoreductase, aldo/keto reductase family.
       0.663
Spro_2466
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yps:YPTB2501 putative LysR-family transcriptional regulator.
 
     0.525
Spro_2465
PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: ecs:ECs3623 putative anti-terminator regulatory protein.
 
     0.466
Spro_3565
PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_03622 putative transport protein.
  
     0.401
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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