STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_3203PFAM: Extracellular ligand-binding receptor; KEGG: ent:Ent638_2491 extracellular ligand-binding receptor. (372 aa)    
Predicted Functional Partners:
Spro_3201
PFAM: inner-membrane translocator; KEGG: ent:Ent638_2493 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
Spro_3202
PFAM: inner-membrane translocator; KEGG: ent:Ent638_2492 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
Spro_3200
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2494 ABC transporter related.
 
 
 0.990
Spro_3199
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2495 ABC transporter related.
 
 
 0.987
Spro_0230
PFAM: inner-membrane translocator; KEGG: yen:YE0232 high-affinity branched-chain amino acid transport system, permease protein.
 
 
 0.979
Spro_2550
PFAM: inner-membrane translocator; KEGG: rso:RSc2439 probable amino-acid transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.978
Spro_0229
PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_0245 high-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.977
Spro_0231
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE0233 high-affinity branched-chain amino acid transport, ATP-binding protein.
 
 
 0.975
Spro_2549
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0822 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.974
Spro_2551
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2864 ABC transporter-related protein.
 
 
 0.972
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.