Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Spro_1333 | Spro_3743 | PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_0142 major facilitator superfamily MFS_1. | TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: yen:YE3242 multidrug resistance protein A. | 0.783 |
Spro_1333 | Spro_4895 | PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_0142 major facilitator superfamily MFS_1. | TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB0010 MFS multidrug:H+ antiporter. | 0.597 |
Spro_3743 | Spro_1333 | TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: yen:YE3242 multidrug resistance protein A. | PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_0142 major facilitator superfamily MFS_1. | 0.783 |
Spro_3743 | Spro_4895 | TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: yen:YE3242 multidrug resistance protein A. | TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB0010 MFS multidrug:H+ antiporter. | 0.529 |
Spro_4894 | Spro_4895 | PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: yen:YE0014 putative GntR-family transcriptional regulator. | TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB0010 MFS multidrug:H+ antiporter. | 0.608 |
Spro_4895 | Spro_1333 | TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB0010 MFS multidrug:H+ antiporter. | PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_0142 major facilitator superfamily MFS_1. | 0.597 |
Spro_4895 | Spro_3743 | TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB0010 MFS multidrug:H+ antiporter. | TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: yen:YE3242 multidrug resistance protein A. | 0.529 |
Spro_4895 | Spro_4894 | TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB0010 MFS multidrug:H+ antiporter. | PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: yen:YE0014 putative GntR-family transcriptional regulator. | 0.608 |