STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacZPFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: ssn:SSO_0299 beta-D-galactosidase; Belongs to the glycosyl hydrolase 2 family. (1028 aa)    
Predicted Functional Partners:
ABP62732.1
PFAM: glycoside hydrolase, clan GH-D; KEGG: eca:ECA0754 alpha-galactosidase.
 
 
 0.970
ABP59928.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.939
glk
Glucokinase; KEGG: ecv:APECO1_4149 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.908
xylA
KEGG: stm:STM3661 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
    
 0.875
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.764
ABP60400.1
6-phosphofructokinase; PFAM: PfkB domain protein; KEGG: stm:STM1326 6-phosphofructokinase II; Belongs to the carbohydrate kinase PfkB family.
   
    0.674
ABP61427.1
Fructose-1-phosphate kinase; PFAM: PfkB domain protein; KEGG: sdy:SDY_2316 fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.674
ABP59611.1
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sdy:SDY_0379 transcriptional repressor of the lac operon.
     
 0.604
ABP59613.1
PFAM: protein of unknown function DUF1428; KEGG: sdy:SDY_0392 hypothetical protein.
       0.586
ABP59130.1
beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase, family 20; KEGG: ppr:PBPRA1268 beta-N-acetylhexosaminidase.
 
 
 0.548
Your Current Organism:
Enterobacter sp. 638
NCBI taxonomy Id: 399742
Other names: E. sp. 638
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