STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP60296.1TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ecs:ECs1480 outer membrane receptor for ferric iron uptake. (728 aa)    
Predicted Functional Partners:
ABP59808.1
PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: stm:STM0597 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase.
   
  
 0.828
ABP58922.1
Lipoprotein; KEGG: ecj:JW5711 predicted lipoprotein.
  
     0.646
ABP62797.1
PFAM: NADPH-dependent FMN reductase; KEGG: spt:SPA3691 hypothetical protein.
 
      0.633
ABP61421.1
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ecs:ECs3047 colicin I receptor precursor.
  
  
 0.632
ABP59797.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: spt:SPA2149 ferrienterobactin receptor precursor.
  
  
 0.630
ABP61083.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sec:SC1882 putative amidohydrolase.
  
     0.614
ABP59800.1
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: ssn:SSO_0537 ATP-dependent serine activating enzyme.
   
  
 0.580
ABP58923.1
PFAM: protein of unknown function DUF1017; KEGG: ecp:ECP_4246 hypothetical protein YjbG precursor.
  
     0.572
ABP60956.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.553
ABP60156.1
KEGG: sfv:SFV_0974 hypothetical protein; Belongs to the UPF0319 family.
  
     0.511
Your Current Organism:
Enterobacter sp. 638
NCBI taxonomy Id: 399742
Other names: E. sp. 638
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