Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
ABP60342.1PFAM: protein of unknown function DUF523; KEGG: bch:Bcen2424_5367 protein of unknown function DUF523. (167 aa)    
Predicted Functional Partners:
ABP60341.1
PFAM: protein of unknown function DUF488; KEGG: sbo:SBO_1301 hypothetical protein.
  
    0.828
ABP60343.1
CTP synthase; KEGG: pfl:PFL_4536 hypothetical protein.
       0.556
ABP58752.1
PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: sec:SC159 putative pathogenicity island protein.
  
     0.534
Your Current Organism:
Enterobacter sp. 638
NCBI taxonomy Id: 399742
Other names: E. sp. 638
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