STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP60357.1PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: stm:STM0411 putative cytoplasmic protein. (114 aa)    
Predicted Functional Partners:
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
   
  
 0.685
ABP60359.1
TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; KEGG: ssn:SSO_1388 cytoplasmic L-asparaginase I.
     
 0.620
ABP60358.1
Nicotinamidase; PFAM: isochorismatase hydrolase; KEGG: ssn:SSO_1387 pyrazinamidase / nicotinamidase; K01440 nicotinamidase.
     
 0.613
ABP59776.1
KEGG: eca:ECA1578 hypothetical protein.
  
     0.534
ABP60360.1
TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: spt:SPA1549 protease IV.
     
 0.484
ABP61639.1
PFAM: amino acid-binding ACT domain protein; KEGG: stt:t0369 glycine cleavage system transcriptional repressor.
  
     0.445
Your Current Organism:
Enterobacter sp. 638
NCBI taxonomy Id: 399742
Other names: E. sp. 638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.