Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABP59506.1 | ABP60542.1 | Ent638_0821 | Ent638_1865 | PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV2920 probable hydrolase. | KEGG: rpe:RPE_2982 alpha/beta hydrolase fold. | 0.445 |
ABP59506.1 | apaH | Ent638_0821 | Ent638_0598 | PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV2920 probable hydrolase. | Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.573 |
ABP59506.1 | birA | Ent638_0821 | Ent638_3943 | PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV2920 probable hydrolase. | Bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.415 |
ABP60541.1 | ABP60542.1 | Ent638_1864 | Ent638_1865 | PFAM: major facilitator superfamily MFS_1; KEGG: nca:Noca_0885 major facilitator superfamily MFS_1. | KEGG: rpe:RPE_2982 alpha/beta hydrolase fold. | 0.459 |
ABP60542.1 | ABP59506.1 | Ent638_1865 | Ent638_0821 | KEGG: rpe:RPE_2982 alpha/beta hydrolase fold. | PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV2920 probable hydrolase. | 0.445 |
ABP60542.1 | ABP60541.1 | Ent638_1865 | Ent638_1864 | KEGG: rpe:RPE_2982 alpha/beta hydrolase fold. | PFAM: major facilitator superfamily MFS_1; KEGG: nca:Noca_0885 major facilitator superfamily MFS_1. | 0.459 |
ABP60542.1 | apaH | Ent638_1865 | Ent638_0598 | KEGG: rpe:RPE_2982 alpha/beta hydrolase fold. | Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.573 |
ABP60542.1 | birA | Ent638_1865 | Ent638_3943 | KEGG: rpe:RPE_2982 alpha/beta hydrolase fold. | Bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.415 |
apaH | ABP59506.1 | Ent638_0598 | Ent638_0821 | Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV2920 probable hydrolase. | 0.573 |
apaH | ABP60542.1 | Ent638_0598 | Ent638_1865 | Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | KEGG: rpe:RPE_2982 alpha/beta hydrolase fold. | 0.573 |
birA | ABP59506.1 | Ent638_3943 | Ent638_0821 | Bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV2920 probable hydrolase. | 0.415 |
birA | ABP60542.1 | Ent638_3943 | Ent638_1865 | Bifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | KEGG: rpe:RPE_2982 alpha/beta hydrolase fold. | 0.415 |