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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP60688.1PFAM: GCN5-related N-acetyltransferase; KEGG: bpm:BURPS1710b_3192 acetyltransferase, GNAT family. (175 aa)    
Predicted Functional Partners:
ABP60778.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: reu:Reut_B5130 helix-turn-helix motif.
 
     0.621
ABP60687.1
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: pfo:Pfl_2176 putative diguanylate cyclase (GGDEF domain) with GAF sensor domain.
       0.560
uxaB
Tagaturonate reductase; PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: sfx:S1699 altronate oxidoreductase; Belongs to the mannitol dehydrogenase family. UxaB subfamily.
       0.505
ABP60686.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: aci:ACIAD2279 hypothetical protein.
       0.441
Your Current Organism:
Enterobacter sp. 638
NCBI taxonomy Id: 399742
Other names: E. sp. 638
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