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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP61872.1PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA1550 putative transport system membrane protein. (415 aa)    
Predicted Functional Partners:
ABP61869.1
PFAM: periplasmic binding protein; KEGG: rle:pRL120713 putative substrate-binding component of ABC transporter.
 
    0.827
ABP61871.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PF00271 probable iron ABC transporter, ATP-binding protein.
 
    0.787
ABP61870.1
PFAM: transport system permease protein; ABC-3 protein; KEGG: ret:RHE_PF00270 probable iron ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.745
ABP60209.1
PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: cps:CPS_4852 ISCps5, transposase.
  
     0.601
ABP60166.1
Hypothetical protein.
  
     0.507
ABP59001.1
KEGG: ecj:JW4070 conserved hypothetical protein with nucleoside triphosphate hydrolase domain.
  
     0.498
ABP62592.1
KEGG: bxe:Bxe_B2037 hypothetical protein.
  
     0.450
ABP61868.1
Transcriptional regulator, NifA subfamily, Fis Family; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: stm:STM2859 formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons (EBP family).
       0.424
Your Current Organism:
Enterobacter sp. 638
NCBI taxonomy Id: 399742
Other names: E. sp. 638
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