STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR31301.1Copper chaperone CopZ. (221 aa)    
Predicted Functional Partners:
SFR31270.1
Superoxide dismutase, Cu-Zn family.
   
 0.918
SFR31300.1
NHL repeat-containing protein.
 
    0.900
SFR54952.1
Outer membrane protein TolC.
  
 0.783
SFR31299.1
Arylsulfatase.
       0.775
SFR33924.1
Cu2+-exporting ATPase.
  
 
 0.771
SFR33944.1
Cd2+/Zn2+-exporting ATPase.
 
 
 0.757
SFR39787.1
Cu+-exporting ATPase.
 
 
 0.756
SFR31302.1
Hypothetical protein.
       0.733
SFR33891.1
Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.703
SFR54641.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
   0.597
Your Current Organism:
Robiginitalea myxolifaciens
NCBI taxonomy Id: 400055
Other names: DSM 21019, Flavobacteriaceae bacterium YM6-073, KCTC 22216, MBIC 06409, R. myxolifaciens, Robiginitalea myxolifaciens Manh et al. 2008, strain YM6-073
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.