STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR31376.1Gliding motility-associated C-terminal domain-containing protein. (2832 aa)    
Predicted Functional Partners:
SFR31628.1
Hypothetical protein; Partial gene; manually curated.
  
 
   0.798
SFR31625.1
Hypothetical protein.
  
 
   0.795
SFR36631.1
C-terminal domain of CHU protein family protein.
  
  
  0.773
SFR45263.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.771
SFR36639.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.759
SFR48010.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.759
SFR48349.1
PKD repeat-containing protein.
  
  
  0.758
SFR31985.1
Hypothetical protein.
  
     0.754
SFR48975.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.746
SFR32998.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
  
     0.745
Your Current Organism:
Robiginitalea myxolifaciens
NCBI taxonomy Id: 400055
Other names: DSM 21019, Flavobacteriaceae bacterium YM6-073, KCTC 22216, MBIC 06409, R. myxolifaciens, Robiginitalea myxolifaciens Manh et al. 2008, strain YM6-073
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