STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR31623.1Gliding motility-associated C-terminal domain-containing protein. (668 aa)    
Predicted Functional Partners:
SFR31620.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.866
SFR32005.1
Gliding motility-associated C-terminal domain-containing protein.
  
   0.811
SFR31625.1
Hypothetical protein.
 
 
   0.787
SFR32829.1
Hypothetical protein.
  
     0.773
SFR47863.1
Very-short-patch-repair endonuclease.
  
     0.773
SFR52798.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.773
SFR35452.1
Hypothetical protein.
  
     0.772
SFR45632.1
Hypothetical protein.
  
     0.772
SFR36631.1
C-terminal domain of CHU protein family protein.
  
  
  0.768
SFR37915.1
Hypothetical protein.
  
     0.766
Your Current Organism:
Robiginitalea myxolifaciens
NCBI taxonomy Id: 400055
Other names: DSM 21019, Flavobacteriaceae bacterium YM6-073, KCTC 22216, MBIC 06409, R. myxolifaciens, Robiginitalea myxolifaciens Manh et al. 2008, strain YM6-073
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