Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR32614.1 | SFR32620.1 | SAMN04490243_0521 | SAMN04490243_0522 | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.999 |
SFR32614.1 | SFR32626.1 | SAMN04490243_0521 | SAMN04490243_0523 | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.973 |
SFR32614.1 | SFR32630.1 | SAMN04490243_0521 | SAMN04490243_0524 | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Phosphoadenylylsulfate reductase (thioredoxin). | 0.820 |
SFR32614.1 | SFR32636.1 | SAMN04490243_0521 | SAMN04490243_0525 | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Rrf2 family protein. | 0.484 |
SFR32614.1 | SFR32647.1 | SAMN04490243_0521 | SAMN04490243_0527 | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Homoserine O-acetyltransferase. | 0.607 |
SFR32620.1 | SFR32614.1 | SAMN04490243_0522 | SAMN04490243_0521 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.999 |
SFR32620.1 | SFR32626.1 | SAMN04490243_0522 | SAMN04490243_0523 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.990 |
SFR32620.1 | SFR32630.1 | SAMN04490243_0522 | SAMN04490243_0524 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Phosphoadenylylsulfate reductase (thioredoxin). | 0.886 |
SFR32620.1 | SFR32636.1 | SAMN04490243_0522 | SAMN04490243_0525 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Rrf2 family protein. | 0.464 |
SFR32620.1 | SFR32647.1 | SAMN04490243_0522 | SAMN04490243_0527 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Homoserine O-acetyltransferase. | 0.516 |
SFR32626.1 | SFR32614.1 | SAMN04490243_0523 | SAMN04490243_0521 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.973 |
SFR32626.1 | SFR32620.1 | SAMN04490243_0523 | SAMN04490243_0522 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.990 |
SFR32626.1 | SFR32630.1 | SAMN04490243_0523 | SAMN04490243_0524 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Phosphoadenylylsulfate reductase (thioredoxin). | 0.991 |
SFR32626.1 | SFR32636.1 | SAMN04490243_0523 | SAMN04490243_0525 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Rrf2 family protein. | 0.560 |
SFR32626.1 | SFR32647.1 | SAMN04490243_0523 | SAMN04490243_0527 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Homoserine O-acetyltransferase. | 0.688 |
SFR32626.1 | metZ | SAMN04490243_0523 | SAMN04490243_0526 | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.791 |
SFR32630.1 | SFR32614.1 | SAMN04490243_0524 | SAMN04490243_0521 | Phosphoadenylylsulfate reductase (thioredoxin). | Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.820 |
SFR32630.1 | SFR32620.1 | SAMN04490243_0524 | SAMN04490243_0522 | Phosphoadenylylsulfate reductase (thioredoxin). | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.886 |
SFR32630.1 | SFR32626.1 | SAMN04490243_0524 | SAMN04490243_0523 | Phosphoadenylylsulfate reductase (thioredoxin). | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.991 |
SFR32630.1 | SFR32636.1 | SAMN04490243_0524 | SAMN04490243_0525 | Phosphoadenylylsulfate reductase (thioredoxin). | Rrf2 family protein. | 0.629 |
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