STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR33526.1L-asparaginase. (343 aa)    
Predicted Functional Partners:
SFR55479.1
Glutamate synthase (NADH) large subunit.
    
 0.897
SFR32647.1
Homoserine O-acetyltransferase.
    
 0.865
panD
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.863
SFR34442.1
Aspartate kinase; Belongs to the aspartokinase family.
  
  
  0.857
SFR52932.1
Asparagine synthase (glutamine-hydrolysing).
     
 0.857
SFR33361.1
N4-(beta-N-acetylglucosaminyl)-L-asparaginase.
     
 0.853
SFR33531.1
TatD DNase family protein.
  
   0.843
SFR39052.1
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
 0.843
SFR31837.1
Aspartate aminotransferase; Manually curated.
     
 0.839
SFR32122.1
Aspartate aminotransferase.
     
 0.839
Your Current Organism:
Robiginitalea myxolifaciens
NCBI taxonomy Id: 400055
Other names: DSM 21019, Flavobacteriaceae bacterium YM6-073, KCTC 22216, MBIC 06409, R. myxolifaciens, Robiginitalea myxolifaciens Manh et al. 2008, strain YM6-073
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