Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFR31767.1 | SFR38170.1 | SAMN04490243_0353 | SAMN04490243_1358 | NUDIX domain-containing protein; Belongs to the Nudix hydrolase family. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.430 |
| SFR33679.1 | SFR38170.1 | SAMN04490243_0714 | SAMN04490243_1358 | Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.418 |
| SFR37941.1 | SFR38170.1 | SAMN04490243_1331 | SAMN04490243_1358 | Exodeoxyribonuclease-3. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.778 |
| SFR37941.1 | SFR48311.1 | SAMN04490243_1331 | SAMN04490243_2069 | Exodeoxyribonuclease-3. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.819 |
| SFR38162.1 | SFR38170.1 | SAMN04490243_1357 | SAMN04490243_1358 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.639 |
| SFR38162.1 | SFR38178.1 | SAMN04490243_1357 | SAMN04490243_1359 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.557 |
| SFR38162.1 | SFR38188.1 | SAMN04490243_1357 | SAMN04490243_1360 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | Gliding motility-associated protein GldE. | 0.488 |
| SFR38162.1 | SFR38195.1 | SAMN04490243_1357 | SAMN04490243_1361 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | Gliding motility-associated lipoprotein GldD. | 0.543 |
| SFR38162.1 | SFR38205.1 | SAMN04490243_1357 | SAMN04490243_1362 | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | Threonine dehydratase. | 0.484 |
| SFR38170.1 | SFR31767.1 | SAMN04490243_1358 | SAMN04490243_0353 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | NUDIX domain-containing protein; Belongs to the Nudix hydrolase family. | 0.430 |
| SFR38170.1 | SFR33679.1 | SAMN04490243_1358 | SAMN04490243_0714 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.418 |
| SFR38170.1 | SFR37941.1 | SAMN04490243_1358 | SAMN04490243_1331 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease-3. | 0.778 |
| SFR38170.1 | SFR38162.1 | SAMN04490243_1358 | SAMN04490243_1357 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | 0.639 |
| SFR38170.1 | SFR38178.1 | SAMN04490243_1358 | SAMN04490243_1359 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.793 |
| SFR38170.1 | SFR38188.1 | SAMN04490243_1358 | SAMN04490243_1360 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Gliding motility-associated protein GldE. | 0.709 |
| SFR38170.1 | SFR38195.1 | SAMN04490243_1358 | SAMN04490243_1361 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Gliding motility-associated lipoprotein GldD. | 0.758 |
| SFR38170.1 | SFR38205.1 | SAMN04490243_1358 | SAMN04490243_1362 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Threonine dehydratase. | 0.701 |
| SFR38170.1 | SFR48311.1 | SAMN04490243_1358 | SAMN04490243_2069 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.573 |
| SFR38170.1 | SFR48785.1 | SAMN04490243_1358 | SAMN04490243_2163 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease-3. | 0.805 |
| SFR38178.1 | SFR38162.1 | SAMN04490243_1359 | SAMN04490243_1357 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | 0.557 |
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