Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR46421.1 | SFR46430.1 | SAMN04490243_1807 | SAMN04490243_1808 | Zinc carboxypeptidase. | Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA. | 0.587 |
SFR46421.1 | SFR46437.1 | SAMN04490243_1807 | SAMN04490243_1809 | Zinc carboxypeptidase. | DinB superfamily protein. | 0.558 |
SFR46430.1 | SFR46421.1 | SAMN04490243_1808 | SAMN04490243_1807 | Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA. | Zinc carboxypeptidase. | 0.587 |
SFR46430.1 | SFR46437.1 | SAMN04490243_1808 | SAMN04490243_1809 | Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA. | DinB superfamily protein. | 0.800 |
SFR46430.1 | SFR47926.1 | SAMN04490243_1808 | SAMN04490243_1994 | Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA. | Transcriptional regulator, AsnC family. | 0.768 |
SFR46430.1 | SFR54641.1 | SAMN04490243_1808 | SAMN04490243_2822 | Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.862 |
SFR46437.1 | SFR46421.1 | SAMN04490243_1809 | SAMN04490243_1807 | DinB superfamily protein. | Zinc carboxypeptidase. | 0.558 |
SFR46437.1 | SFR46430.1 | SAMN04490243_1809 | SAMN04490243_1808 | DinB superfamily protein. | Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA. | 0.800 |
SFR47926.1 | SFR46430.1 | SAMN04490243_1994 | SAMN04490243_1808 | Transcriptional regulator, AsnC family. | Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA. | 0.768 |
SFR47926.1 | SFR54641.1 | SAMN04490243_1994 | SAMN04490243_2822 | Transcriptional regulator, AsnC family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.862 |
SFR54641.1 | SFR46430.1 | SAMN04490243_2822 | SAMN04490243_1808 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA. | 0.862 |
SFR54641.1 | SFR47926.1 | SAMN04490243_2822 | SAMN04490243_1994 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Transcriptional regulator, AsnC family. | 0.862 |