STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR47295.13-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (421 aa)    
Predicted Functional Partners:
SFR47311.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  0.987
SFR47302.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
 0.986
SFR47287.1
Acyl carrier protein.
 
  0.981
SFR33003.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.970
SFR47319.1
Predicted naringenin-chalcone synthase.
 
  
 0.933
SFR34746.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.907
SFR47326.1
Methyltransferase domain-containing protein.
 
  
  0.907
SFR34765.1
Amino acid adenylation domain-containing protein.
  
 0.899
SFR54641.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
 0.893
SFR47335.1
Dehydrogenase (flavoprotein).
 
   
 0.891
Your Current Organism:
Robiginitalea myxolifaciens
NCBI taxonomy Id: 400055
Other names: DSM 21019, Flavobacteriaceae bacterium YM6-073, KCTC 22216, MBIC 06409, R. myxolifaciens, Robiginitalea myxolifaciens Manh et al. 2008, strain YM6-073
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