Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFR31585.1 | SFR39895.1 | SAMN04490243_0283 | SAMN04490243_1580 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.489 |
| SFR31585.1 | SFR48325.1 | SAMN04490243_0283 | SAMN04490243_2072 | AraC-type DNA-binding protein. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.542 |
| SFR31585.1 | rpoA | SAMN04490243_0283 | SAMN04490243_2742 | AraC-type DNA-binding protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.437 |
| SFR39895.1 | SFR31585.1 | SAMN04490243_1580 | SAMN04490243_0283 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.489 |
| SFR39895.1 | SFR48325.1 | SAMN04490243_1580 | SAMN04490243_2072 | AraC-type DNA-binding protein. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.542 |
| SFR39895.1 | rpoA | SAMN04490243_1580 | SAMN04490243_2742 | AraC-type DNA-binding protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.437 |
| SFR45046.1 | SFR48325.1 | SAMN04490243_1661 | SAMN04490243_2072 | RNA polymerase Rpb6. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.718 |
| SFR45046.1 | nusA | SAMN04490243_1661 | SAMN04490243_0645 | RNA polymerase Rpb6. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.949 |
| SFR45046.1 | rpoA | SAMN04490243_1661 | SAMN04490243_2742 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SFR45046.1 | rpoB | SAMN04490243_1661 | SAMN04490243_0309 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
| SFR45046.1 | rpoC | SAMN04490243_1661 | SAMN04490243_0308 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
| SFR48325.1 | SFR31585.1 | SAMN04490243_2072 | SAMN04490243_0283 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | AraC-type DNA-binding protein. | 0.542 |
| SFR48325.1 | SFR39895.1 | SAMN04490243_2072 | SAMN04490243_1580 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | AraC-type DNA-binding protein. | 0.542 |
| SFR48325.1 | SFR45046.1 | SAMN04490243_2072 | SAMN04490243_1661 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase Rpb6. | 0.718 |
| SFR48325.1 | SFR48330.1 | SAMN04490243_2072 | SAMN04490243_2073 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Surface antigen. | 0.729 |
| SFR48325.1 | dnaG | SAMN04490243_2072 | SAMN04490243_0491 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | 0.744 |
| SFR48325.1 | lepA | SAMN04490243_2072 | SAMN04490243_1181 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.639 |
| SFR48325.1 | nusA | SAMN04490243_2072 | SAMN04490243_0645 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.692 |
| SFR48325.1 | rpoA | SAMN04490243_2072 | SAMN04490243_2742 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.812 |
| SFR48325.1 | rpoB | SAMN04490243_2072 | SAMN04490243_0309 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.803 |
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