STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR50486.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
SFR50495.1
Multidrug resistance protein, MATE family.
 
     0.817
SFR50468.1
4-amino-4-deoxy-L-arabinose transferase.
       0.797
SFR50478.1
Undecaprenyl-diphosphatase.
       0.797
SFR31773.1
Hypothetical protein.
  
     0.771
SFR50505.1
XTP/dITP diphosphohydrolase.
       0.741
SFR38970.1
Mevalonate kinase.
  
     0.724
SFR48198.1
Hypothetical protein.
  
     0.709
SFR31221.1
Hypothetical protein.
  
     0.697
SFR49371.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.688
SFR50655.1
pRiA4b ORF-3-like protein.
  
     0.638
Your Current Organism:
Robiginitalea myxolifaciens
NCBI taxonomy Id: 400055
Other names: DSM 21019, Flavobacteriaceae bacterium YM6-073, KCTC 22216, MBIC 06409, R. myxolifaciens, Robiginitalea myxolifaciens Manh et al. 2008, strain YM6-073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.