node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR45046.1 | SFR50881.1 | SAMN04490243_1661 | SAMN04490243_2425 | RNA polymerase Rpb6. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.814 |
SFR45046.1 | nusA | SAMN04490243_1661 | SAMN04490243_0645 | RNA polymerase Rpb6. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.949 |
SFR45046.1 | rpoA | SAMN04490243_1661 | SAMN04490243_2742 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
SFR45046.1 | rpoB | SAMN04490243_1661 | SAMN04490243_0309 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
SFR45046.1 | rpsD | SAMN04490243_1661 | SAMN04490243_2743 | RNA polymerase Rpb6. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.929 |
SFR45046.1 | rpsJ | SAMN04490243_1661 | SAMN04490243_2769 | RNA polymerase Rpb6. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.721 |
SFR48482.1 | SFR50881.1 | SAMN04490243_2104 | SAMN04490243_2425 | methionyl-tRNA formyltransferase. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.709 |
SFR50881.1 | SFR45046.1 | SAMN04490243_2425 | SAMN04490243_1661 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | RNA polymerase Rpb6. | 0.814 |
SFR50881.1 | SFR48482.1 | SAMN04490243_2425 | SAMN04490243_2104 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | methionyl-tRNA formyltransferase. | 0.709 |
SFR50881.1 | fmt | SAMN04490243_2425 | SAMN04490243_2048 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.709 |
SFR50881.1 | nusA | SAMN04490243_2425 | SAMN04490243_0645 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.875 |
SFR50881.1 | ribB | SAMN04490243_2425 | SAMN04490243_2002 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.717 |
SFR50881.1 | ribH | SAMN04490243_2425 | SAMN04490243_0224 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.777 |
SFR50881.1 | rpoA | SAMN04490243_2425 | SAMN04490243_2742 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.720 |
SFR50881.1 | rpoB | SAMN04490243_2425 | SAMN04490243_0309 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.680 |
SFR50881.1 | rpsD | SAMN04490243_2425 | SAMN04490243_2743 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.686 |
SFR50881.1 | rpsJ | SAMN04490243_2425 | SAMN04490243_2769 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.944 |
fmt | SFR50881.1 | SAMN04490243_2048 | SAMN04490243_2425 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.709 |
nusA | SFR45046.1 | SAMN04490243_0645 | SAMN04490243_1661 | NusA antitermination factor; Participates in both transcription termination and antitermination. | RNA polymerase Rpb6. | 0.949 |
nusA | SFR50881.1 | SAMN04490243_0645 | SAMN04490243_2425 | NusA antitermination factor; Participates in both transcription termination and antitermination. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.875 |