STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKD02000.1Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (492 aa)    
Predicted Functional Partners:
AKD02138.1
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.788
AKD02258.1
PutA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.788
AKD04631.1
Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.735
AKD05910.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.689
AKD02495.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.616
AKD05051.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.590
AKD05631.1
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
  
  
 0.585
AKD05434.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
AKD05502.1
Gliding motility-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.536
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.529
Your Current Organism:
Pontibacter korlensis
NCBI taxonomy Id: 400092
Other names: CCTCC AB 206081, NRRL B-51097, P. korlensis, Pontibacter korlensis Zhang et al. 2008, Pontibacter sp. z1, Pontibacter sp. z2, strain X14-1
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