Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKD02210.1 | AKD02211.1 | PKOR_02515 | PKOR_02520 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
AKD02210.1 | AKD03325.1 | PKOR_02515 | PKOR_09575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.794 |
AKD02210.1 | AKD03967.1 | PKOR_02515 | PKOR_13740 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH:ubiquinone oxidoreductase; NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.886 |
AKD02210.1 | AKD04847.1 | PKOR_02515 | PKOR_19240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. | 0.597 |
AKD02210.1 | AKD05246.1 | PKOR_02515 | PKOR_22000 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
AKD02211.1 | AKD02210.1 | PKOR_02520 | PKOR_02515 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
AKD03325.1 | AKD02210.1 | PKOR_09575 | PKOR_02515 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.794 |
AKD03967.1 | AKD02210.1 | PKOR_13740 | PKOR_02515 | NADH:ubiquinone oxidoreductase; NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.886 |
AKD04847.1 | AKD02210.1 | PKOR_19240 | PKOR_02515 | Phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
AKD05246.1 | AKD02210.1 | PKOR_22000 | PKOR_02515 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |