Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKD02514.1 | AKD02515.1 | PKOR_04475 | PKOR_04480 | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
AKD02514.1 | AKD02516.1 | PKOR_04475 | PKOR_04485 | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Phosphate ABC transporter substrate-binding protein, PhoT family; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.684 |
AKD02514.1 | AKD02517.1 | PKOR_04475 | PKOR_04490 | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TPR repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.667 |
AKD02515.1 | AKD02514.1 | PKOR_04480 | PKOR_04475 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.496 |
AKD02515.1 | AKD02516.1 | PKOR_04480 | PKOR_04485 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate ABC transporter substrate-binding protein, PhoT family; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.780 |
AKD02515.1 | AKD02517.1 | PKOR_04480 | PKOR_04490 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | TPR repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.622 |
AKD02516.1 | AKD02514.1 | PKOR_04485 | PKOR_04475 | Phosphate ABC transporter substrate-binding protein, PhoT family; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.684 |
AKD02516.1 | AKD02515.1 | PKOR_04485 | PKOR_04480 | Phosphate ABC transporter substrate-binding protein, PhoT family; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.780 |
AKD02516.1 | AKD02517.1 | PKOR_04485 | PKOR_04490 | Phosphate ABC transporter substrate-binding protein, PhoT family; Derived by automated computational analysis using gene prediction method: Protein Homology. | TPR repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.876 |
AKD02517.1 | AKD02514.1 | PKOR_04490 | PKOR_04475 | TPR repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.667 |
AKD02517.1 | AKD02515.1 | PKOR_04490 | PKOR_04480 | TPR repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.622 |
AKD02517.1 | AKD02516.1 | PKOR_04490 | PKOR_04485 | TPR repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate ABC transporter substrate-binding protein, PhoT family; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.876 |