STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKD03730.1Altronate oxidoreductase; Catalyzes the formation of D-tagaturonate from D-altronate; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)    
Predicted Functional Partners:
uxaC-2
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.989
AKD02281.1
Altronate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
AKD03751.1
Altronate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
uxaC
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.978
AKD03728.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.808
AKD03727.1
Ketohydroxyglutarate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.803
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
 0.796
kduI
5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.747
AKD03732.1
Gluconate 5-dehydrogenase; Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.641
AKD03731.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.592
Your Current Organism:
Pontibacter korlensis
NCBI taxonomy Id: 400092
Other names: CCTCC AB 206081, NRRL B-51097, P. korlensis, Pontibacter korlensis Zhang et al. 2008, Pontibacter sp. z1, Pontibacter sp. z2, strain X14-1
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