STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKD04137.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)    
Predicted Functional Partners:
AKD03967.1
NADH:ubiquinone oxidoreductase; NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.983
AKD05742.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
0.982
AKD02992.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
0.931
AKD03326.1
Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.880
AKD02741.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.792
AKD04590.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.792
AKD05530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.786
AKD03567.1
Hypothetical protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.757
AKD05648.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.756
AKD02381.1
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 
 0.725
Your Current Organism:
Pontibacter korlensis
NCBI taxonomy Id: 400092
Other names: CCTCC AB 206081, NRRL B-51097, P. korlensis, Pontibacter korlensis Zhang et al. 2008, Pontibacter sp. z1, Pontibacter sp. z2, strain X14-1
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