STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1S_0010RND type efflux pump. (334 aa)    
Predicted Functional Partners:
A1S_0011
Hypothetical protein.
     
 0.750
A1S_0009
Putative RND type efflux pump.
      
0.689
A1S_0026
Alkanesulfonate transport protein; ABC superfamily atp_bind.
   
 
 0.689
A1S_1285
ABC transporter related.
   
 
 0.689
A1S_1722
Putative ATP-binding component of ABC transporter.
   
 
 0.689
A1S_0027
Alkanesulfonate transport protein; ABC superfamily membrane.
   
 
 0.685
A1S_1286
Binding-protein-dependent transport systems inner membrane component.
   
 
 0.685
A1S_1287
ABC nitrate/sulfonate/bicarbonate family transporter.
   
 
 0.685
A1S_1444
ABC taurine transporter permease subunit.
   
 
 0.685
A1S_1721
ABC-type nitrate/sulfonate/bicarbonate transport system permease component.
   
 
 0.685
Your Current Organism:
Acinetobacter baumannii ATCC 17978
NCBI taxonomy Id: 400667
Other names: A. baumannii ATCC 17978, Acinetobacter baumannii str. ATCC 17978, Acinetobacter baumannii strain ATCC 17978
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