Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A1S_0012 | A1S_0112 | Hydrolase. | Acyl-CoA synthetase/AMP-acid ligases II; AMP-forming. | 0.797 |
A1S_0012 | A1S_0115 | Hydrolase. | Amino acid adenylation. | 0.737 |
A1S_0012 | A1S_0950 | Hydrolase. | Putative ferredoxin reductase subunit of phenylpropionate dioxygenase. | 0.667 |
A1S_0012 | A1S_0951 | Hydrolase. | Putative ferredoxin reductase subunit of phenylpropionate dioxygenase. | 0.667 |
A1S_0012 | A1S_1328 | Hydrolase. | Putative oxidoreductase. | 0.666 |
A1S_0012 | A1S_1329 | Hydrolase. | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | 0.666 |
A1S_0012 | A1S_1709 | Hydrolase. | Hypothetical protein. | 0.666 |
A1S_0012 | A1S_2997 | Hydrolase. | Bis(5'-nucleosyl)-tetraphosphatase symmetrical; Diadenosine tetraphosphatase; Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase. | 0.661 |
A1S_0012 | A1S_3327 | Hydrolase. | Dihydrolipoamide S-acetyltransferase E2 component of the pyruvate dehydrogenase complex. | 0.635 |
A1S_0012 | A1S_3866 | Hydrolase. | Hypothetical protein. | 0.687 |
A1S_0112 | A1S_0012 | Acyl-CoA synthetase/AMP-acid ligases II; AMP-forming. | Hydrolase. | 0.797 |
A1S_0112 | A1S_0115 | Acyl-CoA synthetase/AMP-acid ligases II; AMP-forming. | Amino acid adenylation. | 0.999 |
A1S_0112 | A1S_3327 | Acyl-CoA synthetase/AMP-acid ligases II; AMP-forming. | Dihydrolipoamide S-acetyltransferase E2 component of the pyruvate dehydrogenase complex. | 0.911 |
A1S_0112 | A1S_3866 | Acyl-CoA synthetase/AMP-acid ligases II; AMP-forming. | Hypothetical protein. | 0.553 |
A1S_0115 | A1S_0012 | Amino acid adenylation. | Hydrolase. | 0.737 |
A1S_0115 | A1S_0112 | Amino acid adenylation. | Acyl-CoA synthetase/AMP-acid ligases II; AMP-forming. | 0.999 |
A1S_0115 | A1S_3327 | Amino acid adenylation. | Dihydrolipoamide S-acetyltransferase E2 component of the pyruvate dehydrogenase complex. | 0.777 |
A1S_0115 | A1S_3866 | Amino acid adenylation. | Hypothetical protein. | 0.486 |
A1S_0950 | A1S_0012 | Putative ferredoxin reductase subunit of phenylpropionate dioxygenase. | Hydrolase. | 0.667 |
A1S_0950 | A1S_0951 | Putative ferredoxin reductase subunit of phenylpropionate dioxygenase. | Putative ferredoxin reductase subunit of phenylpropionate dioxygenase. | 0.943 |
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