Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A1S_0183 | A1S_0352 | Hypothetical protein. | polyphosphate-AMP phosphotransferase. | 0.645 |
A1S_0200 | A1S_0352 | Inorganic pyrophosphatase. | polyphosphate-AMP phosphotransferase. | 0.504 |
A1S_0200 | A1S_0990 | Inorganic pyrophosphatase. | Polyphosphate kinase. | 0.951 |
A1S_0292 | A1S_0352 | Putative outer membrane protein W. | polyphosphate-AMP phosphotransferase. | 0.557 |
A1S_0348 | A1S_0349 | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway. | Hypothetical protein. | 0.900 |
A1S_0348 | A1S_0351 | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway. | Hypothetical protein. | 0.766 |
A1S_0348 | A1S_0352 | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway. | polyphosphate-AMP phosphotransferase. | 0.649 |
A1S_0349 | A1S_0348 | Hypothetical protein. | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway. | 0.900 |
A1S_0349 | A1S_0351 | Hypothetical protein. | Hypothetical protein. | 0.827 |
A1S_0349 | A1S_0352 | Hypothetical protein. | polyphosphate-AMP phosphotransferase. | 0.651 |
A1S_0351 | A1S_0348 | Hypothetical protein. | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway. | 0.766 |
A1S_0351 | A1S_0349 | Hypothetical protein. | Hypothetical protein. | 0.827 |
A1S_0351 | A1S_0352 | Hypothetical protein. | polyphosphate-AMP phosphotransferase. | 0.737 |
A1S_0351 | A1S_2075 | Hypothetical protein. | Putative outer membrane protein. | 0.601 |
A1S_0351 | A1S_2325 | Hypothetical protein. | Putative outer membrane protein. | 0.553 |
A1S_0352 | A1S_0183 | polyphosphate-AMP phosphotransferase. | Hypothetical protein. | 0.645 |
A1S_0352 | A1S_0200 | polyphosphate-AMP phosphotransferase. | Inorganic pyrophosphatase. | 0.504 |
A1S_0352 | A1S_0292 | polyphosphate-AMP phosphotransferase. | Putative outer membrane protein W. | 0.557 |
A1S_0352 | A1S_0348 | polyphosphate-AMP phosphotransferase. | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway. | 0.649 |
A1S_0352 | A1S_0349 | polyphosphate-AMP phosphotransferase. | Hypothetical protein. | 0.651 |
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