STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1S_0439DNA topoisomerase type I omega protein. (878 aa)    
Predicted Functional Partners:
A1S_0541
leucyl-tRNA synthetase.
   
 
 0.974
A1S_0542
leucyl-tRNA synthetase.
   
 
 0.974
A1S_3287
RecBCD nuclease ssDNA-binding protein.
  
 
 0.971
A1S_3185
Glutamate synthase large chain precursor.
  
  
 0.927
A1S_0612
DNA polymerase I.
 
 0.881
A1S_3056
RNA polymerase alpha subunit.
   
 
 0.841
A1S_0438
Hypothetical protein.
       0.822
A1S_0440
Hypothetical protein.
       0.764
A1S_0799
DNA ligase.
 
 
 
 0.763
A1S_1962
DNA strand exchange and recombination protein.
  
 0.754
Your Current Organism:
Acinetobacter baumannii ATCC 17978
NCBI taxonomy Id: 400667
Other names: A. baumannii ATCC 17978, Acinetobacter baumannii str. ATCC 17978, Acinetobacter baumannii strain ATCC 17978
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.