STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1S_05021-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. (371 aa)    
Predicted Functional Partners:
A1S_1982
2C-methyl-D-erythritol 24-cyclodiphosphate synthase.
 
  
 0.994
A1S_3169
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Also involved in penicillin tolerance and control of the stringent response Seems to directly or indirectly interact with relA to maintain it in an inactive form during normal growth.
 
 
 0.994
A1S_0503
histidyl-tRNA synthetase.
  
  
 0.963
A1S_0501
Hypothetical protein.
  
    0.927
A1S_1895
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
 
  
 0.898
A1S_0500
Type 4 fimbrial biogenesis protein.
       0.848
A1S_0504
Hypothetical protein.
  
    0.848
A1S_1971
1-deoxy-d-xylulose 5-phosphate reductoisomerase.
 
   
 0.843
A1S_0505
Hypothetical protein.
  
    0.836
A1S_0499
Putative Fe-S-cluster redox enzyme.
 
    0.827
Your Current Organism:
Acinetobacter baumannii ATCC 17978
NCBI taxonomy Id: 400667
Other names: A. baumannii ATCC 17978, Acinetobacter baumannii str. ATCC 17978, Acinetobacter baumannii strain ATCC 17978
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